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基因组学及表观基因组学
Genomics & Epigenomics
发布时间:2023-12-28    

14    Batool Z, Kamal MA, Shen B. Evidence-based advancements in breast cancer genetic counseling: a review. Breast Cancer. 2024 Dec 17. doi: 10.1007/s12282-024-01660-9. Epub ahead of print. PMID: 39688807.

13    Li Y, Pan G, Wang S, Li Z, Yang R, Jiang Y, Chen Y, Li SC, Shen B. Comprehensive human respiratory genome catalogue underlies the high resolution and precision of the respiratory microbiome. Brief Bioinform. 2024 Nov 22;26(1):bbae620. doi: 10.1093/bib/bbae620. PMID: 39581874; PMCID: PMC11586125.

12    Chen J, Jia Y, Zhong J, Zhang K, Dai H, He G, Li F, Zeng L, Fan C, Xu H. Novel mutation leading to splice donor loss in a conserved site of DMD gene causes Duchenne muscular dystrophy with cryptorchidism. J Med Genet. 2024 May 10:jmg-2024-109896. doi: 10.1136/jmg-2024-109896. Epub ahead of print. PMID: 38621993.

11    Chen J, He X, Jakovlić I. Positive selection-driven fixation of a hominin-specific amino acid mutation related to dephosphorylation in IRF9. BMC Ecol Evol. 2022 Nov 10;22(1):132. doi: 10.1186/s12862-022-02088-5. PMID: 36357830.

10    Jia Y, Chen J, Zhong J, He X, Zeng L, Wang Y, Li J, Xia S, Ye E, Zhao J, Ke B, Li C. Novel Rare Mutation in a Conserved Site of PTPRB Causes Human Hypoplastic Left Heart Syndrome. Clin Genet. 2022 Sep 23. doi: 10.1111/cge.14234. Epub ahead of print. PMID: 36148623.

9    Alqahtani T, Khandia R, Puranik N, Alqahtani AM, Chidambaram K, Kamal MA. Codon Usage is Influenced by Compositional Constraints in Genes Associated with Dementia. Front Genet. 2022 Aug 9;13:884348. doi: 10.3389/fgene.2022.884348. PMID: 36017501; PMCID: PMC9395603.

8    Li J, Xu J, Yang T, Chen J, Li F, Shen B, Fan C. Genome-wide methylation analyses of human sperm unravel novel differentially methylated regions in asthenozoospermia. Epigenomics. 2022 Aug 25. doi: 10.2217/epi-2022-0122. Epub ahead of print. PMID: 36004499.

7    Khandia R, Saeed M, Alharbi AM, Ashraf GM, Greig NH, Kamal MA. Codon Usage Bias Correlates With Gene Length in Neurodegeneration Associated Genes. Front Neurosci. 2022 Jul 4;16:895607. doi: 10.3389/fnins.2022.895607. PMID: 35860292; PMCID: PMC9289476.

6    Li Y, Jiang Y, Li Z, Yu Y, Chen J, Jia W, Kaow Ng Y, Ye F, Cheng Li S, Shen B. Both simulation and sequencing data reveal coinfections with multiple SARS-CoV-2 variants in the COVID-19 pandemic. Comput Struct Biotechnol J. 2022;20:1389-1401. doi: 10.1016/j.csbj.2022.03.011. Epub 2022 Mar 18. PMID: 35342534; PMCID: PMC8930779.

5    Chen J, Zhong J, He X, Li X, Ni P, Safner T, Šprem N, Han J. The de novo assembly of a European wild boar genome revealed unique patterns of chromosomal structural variations and segmental duplications. Anim Genet. 2022 Mar 2. doi: 10.1111/age.13181. Epub ahead of print. PMID: 35238061.

4    Yang N, Chen H, Hu M, Zhang G, Amanullah, Deng C. Evolution of a splice variant that acts as an endogenous antagonist of the original INSL3 in primates. Gene. 2020 Sep 5;754:144861. doi: 10.1016/j.gene.2020.144861. Epub 2020 Jun 9. PMID: 32531454.

3    Skryabin BV, Kummerfeld DM, Gubar L, Seeger B, Kaiser H, Stegemann A, Roth J, Meuth SG, Pavenstädt H, Sherwood J, Pap T, Wedlich-Söldner R, Sunderkötter C, Schwartz YB, Brosius J, Rozhdestvensky TS. Pervasive head-to-tail insertions of DNA templates mask desired CRISPR-Cas9-mediated genome editing events. Sci Adv. 2020 Feb 12;6(7):eaax2941. doi: 10.1126/sciadv.aax2941. PMID: 32095517; PMCID: PMC7015686.

2    Long M, Shen B. Evolution of genes and genomes: an emerging paradigm in life science. Sci China Life Sci. 2019 Apr;62(4):435-436. doi: 10.1007/s11427-018-9448-x. Epub 2019 Apr 16. PMID: 30929192.

1    Zhang W, Gao Y, Long M, Shen B. Origination and evolution of orphan genes and de novo genes in the genome of Caenorhabditis elegans. Sci China Life Sci. 2019 Apr;62(4):579-593. doi: 10.1007/s11427-019-9482-0. Epub 2019 Mar 21. PMID: 30919281.

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